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EMB3105 EMB3105 AT4G23620 AT4G23620 RPL3P RPL3P RPL5B RPL5B RPL5A RPL5A AT2G42710 AT2G42710 EMB2207 EMB2207 TWN2 TWN2 RPL3B RPL3B AT4G13780 AT4G13780 AT1G57720 AT1G57720
"TWN2" - TWIN 2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TWN2TWIN 2; Required for embryo development and seed viability (1108 aa)    
Predicted Functional Partners:
AT4G13780
methionyl-tRNA synthetase (797 aa)
     
 
  0.951
RPL5A
Ribosomal protein L5; Binds to 5S ribosomal RNA (301 aa)
     
 
  0.936
RPL5B
Ribosomal protein L5 B; Binds to 5S ribosomal RNA (301 aa)
     
 
  0.932
EMB3105
EMBRYO DEFECTIVE 3105; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (170 aa)
     
 
  0.932
RPL3P
50S ribosomal protein L3-2; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (324 aa)
     
 
  0.924
EMB2207
Ribosomal protein 1 (389 aa)
     
 
  0.916
AT4G23620
Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (277 aa)
   
 
  0.915
AT2G42710
Ribosomal protein L1p/L10e family (415 aa)
     
 
  0.913
RPL3B
R-protein L3 B (390 aa)
     
 
  0.911
AT1G57720
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
 
  0.911
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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