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AT2G20060 AT2G20060 AT5G64650 AT5G64650 AT3G54210 AT3G54210 AT5G09770 AT5G09770 AT5G15220 AT5G15220 AT5G64670 AT5G64670 DECOY DECOY AT1G07830 AT1G07830 RPL3P RPL3P AT3G01790 AT3G01790 AT2G43030 AT2G43030
DECOY in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DECOYDECOY (233 aa)    
Predicted Functional Partners:
AT2G20060
Ribosomal protein L4/L1 family (300 aa)
     
      0.995
AT5G09770
Ribosomal protein L17 family protein (160 aa)
     
      0.995
AT1G07830
Ribosomal protein L29 family protein (144 aa)
     
 
  0.993
RPL3P
50S ribosomal protein L3-2; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (324 aa)
     
      0.993
AT3G01790
Large subunit ribosomal protein L13 (205 aa)
     
      0.992
AT5G64650
Large subunit ribosomal protein L17 (160 aa)
     
      0.992
AT5G64670
Ribosomal protein L18e/L15 (281 aa)
     
 
  0.991
AT5G15220
Large subunit ribosomal protein L27 (154 aa)
     
      0.989
AT3G54210
50S ribosomal protein L17; This protein binds directly to 23S ribosomal RNA (211 aa)
     
      0.989
AT2G43030
50S ribosomal protein L3-1; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (271 aa)
     
      0.988
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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