Full Link:
STRINGSTRING
AT1G61370 AT1G61370 EMB3113 EMB3113 RK3 RK3 AT4G27290 AT4G27290 AT1G16180 AT1G16180 AT3G30390 AT3G30390
"AT1G16180" - Serinc-domain containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G16180Serinc-domain containing protein (412 aa)    
Predicted Functional Partners:
AT4G27290
S-locus lectin protein kinase-like protein (783 aa)
           
  0.502
RK3
Receptor kinase 3; Involved in the regulation of cellular expansion and differentiation (850 aa)
           
  0.502
EMB3113
EMBRYO DEFECTIVE 3113; Binds directly to 16S ribosomal RNA (303 aa)
           
  0.502
AT1G61370
S-locus lectin protein kinase family protein (814 aa)
           
  0.502
AT3G30390
Encodes a putative amino acid transporter (460 aa)
     
        0.480
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (2%)