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AT2G19980 AT2G19980 At2g04660 At2g04660 RING RING F20D23.9 F20D23.9 AT1G17285 AT1G17285 AT1G17430 AT1G17430 AT1G17270 AT1G17270 AT1G17160 AT1G17160 AT1G17145 AT1G17145 AT1G17230 AT1G17230 RTFL11 RTFL11
"F20D23.9" - IAP-like protein 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F20D23.9IAP-like protein 1 (958 aa)    
Predicted Functional Partners:
AT2G19980
Allergen V5/Tpx-1-related family protein (165 aa)
           
  0.862
AT1G17145
RING/U-box superfamily protein (335 aa)
     
   
  0.693
AT1G17230
Leucine-rich receptor-like protein kinase (1101 aa)
     
   
  0.680
AT1G17160
Ribokinase (379 aa)
     
   
  0.677
RING
SBP (S-ribonuclease binding protein) family protein; E3 ubiquitin-protein ligase involved in the regulation of pathogen and abiotic stress responses by facilitating degradation of MYB108/BOI. Attenuates cell death by preventing caspase activation. Has no effect on the stability of the DELLA proteins. Not regulated by MYB108/BOI (304 aa)
           
  0.670
At2g04660
Anaphase-promoting complex subunit 2; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endor [...] (865 aa)
           
  0.670
AT1G17430
alpha/beta-Hydrolases superfamily protein (332 aa)
           
  0.670
AT1G17285
Uncharacterized protein (95 aa)
           
  0.670
AT1G17270
peptide-O-fucosyltransferase (564 aa)
           
  0.670
RTFL11
ROTUNDIFOLIA like 11 (119 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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