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STRINGSTRING
SCPL45 SCPL45 AT4G34070 AT4G34070 AT2G33796 AT2G33796 AT2G41590 AT2G41590 AT2G41600 AT2G41600 AT4G35850 AT4G35850 AT1G28100 AT1G28100 AT1G17744 AT1G17744 AT2G33793 AT2G33793 AT2G02795 AT2G02795 AT1G51402 AT1G51402
"AT1G17744" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G17744Uncharacterized protein (146 aa)    
Predicted Functional Partners:
SCPL45
Serine carboxypeptidase-like 45; Probable carboxypeptidase (461 aa)
           
  0.734
AT4G34070
Calcium-binding EF-hand family protein (313 aa)
           
  0.706
AT2G02795
Uncharacterized protein (168 aa)
           
  0.706
AT2G41590
Uncharacterized protein (367 aa)
           
  0.705
AT2G33796
FBD-like domain family protein (109 aa)
           
  0.705
AT2G33793
Uncharacterized protein (212 aa)
           
  0.705
AT2G41600
Glycoprotein family protein (220 aa)
           
  0.670
AT1G28100
Uncharacterized protein; Required for neoxanthin biosynthesis. Probably not involved directly in the enzymatic conversion of violaxanthin to neoxanthin. Is necessary but not sufficient for neoxanthin synthesis (290 aa)
           
  0.670
AT4G35850
Pentatricopeptide repeat-containing protein (444 aa)
           
  0.633
AT1G51402
Uncharacterized protein (60 aa)
           
  0.633
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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