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AT5G36710 AT5G36710 AT4G15830 AT4G15830 ENODL15 ENODL15 AT3G02640 AT3G02640 SYP111 SYP111 ENODL14 ENODL14 CSLD5 CSLD5 ATLP-1 ATLP-1 AT3G53190 AT3G53190 RBP45B RBP45B AT2G28790 AT2G28790
"ATLP-1" - Thaumatin-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATLP-1Thaumatin-like protein (244 aa)    
Predicted Functional Partners:
RBP45B
RNA recognition motif-containing protein; Heterogeneous nuclear ribonucleoprotein (hnRNP)-protein binding the poly(A) tail of mRNA and probably involved in some steps of pre-mRNA maturation (405 aa)
           
  0.957
ENODL15
Early nodulin-like protein 15 (177 aa)
     
        0.863
AT3G02640
Uncharacterized protein (185 aa)
     
        0.863
AT3G53190
Putative pectate lyase 12 (483 aa)
     
        0.853
ENODL14
Early nodulin-like protein 1 (182 aa)
     
        0.820
SYP111
Syntaxin of plants 111; Involved in cytokinesis. Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division (310 aa)
     
        0.816
AT4G15830
ARM repeat superfamily protein (296 aa)
     
        0.809
AT2G28790
Pathogenesis-related thaumatin-like protein (249 aa)
     
   
0.807
CSLD5
1,4-beta-D-xylan synthase; Involved in stem and root growth. Possesses xylan and homogalacturonan synthase activity (1181 aa)
     
        0.789
AT5G36710
Uncharacterized protein (183 aa)
     
        0.770
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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