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STRINGSTRING
GAPA GAPA TIM TIM GAPB GAPB TPI TPI AT1G18270 AT1G18270 PGK1 PGK1 GAPC1 GAPC1 AT1G56190 AT1G56190 PGK PGK GAPC2 GAPC2 GAPCP-1 GAPCP-1
"AT1G18270" - Ketose-bisphosphate aldolase class-II-like protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G18270Ketose-bisphosphate aldolase class-II-like protein (1393 aa)    
Predicted Functional Partners:
PGK1
Phosphoglycerate kinase 1 (481 aa)
   
  0.997
PGK
Phosphoglycerate kinase (401 aa)
   
  0.996
AT1G56190
Phosphoglycerate kinase (478 aa)
   
  0.996
TPI
Triosephosphate isomerase (254 aa)
   
  0.995
TIM
Triosephosphate isomerase (315 aa)
   
  0.995
GAPCP-1
Glyceraldehyde 3-phosphate dehydrogenase; Involved in plastidial glycolytic pathway and plays a specific role in glycolytic energy production in non-green plastids and chloroplasts. Essential for breakdown of starch to form sucrose for export to non-photosynthetic tissues, and to generate primary metabolites for anabolic pathways such as fatty acid and amino acid synthesis. Plays an important role in plant development by providing substrates for the phosphorylated pathway of serine biosynthesis in roots. Plays a crucial role in pollen development. Functionally redundant with GAPCP2 (422 aa)
   
  0.970
GAPB
Glyceraldehyde-3-phosphate dehydrogenase B; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3-diphosphoglycerate by NADPH (By similarity) (447 aa)
   
  0.959
GAPC2
Glyceraldehyde 3-phosphate dehydrogenase; Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism (By similarity). Binds DNA in vitro (338 aa)
   
  0.959
GAPC1
Glyceraldehyde-3-phosphate dehydrogenase, cytosolic; Key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Essential for the maintenance of cellular ATP levels and carbohydrate metabolism. Involved in response to oxidative stress by mediating plant responses to abscisic acid (ABA) and water deficits through the activation of PLDDELTA and production of phosphatidic acid (PA), a multifunctional stress signaling lipid in plants. Required for full fertility. Binds DNA in vitro (338 aa)
   
  0.956
GAPA
Glyceraldehyde-3-phosphate dehydrogenase A; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3-diphosphoglycerate by NADPH (By similarity) (396 aa)
   
  0.951
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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