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BG_PPAP BG_PPAP PDLP6 PDLP6 EXPA20 EXPA20 AT5G12110 AT5G12110 ORF275 ORF275 ORF111B ORF111B CSLC5 CSLC5 PDCB3 PDCB3 PDLP8 PDLP8 AT2G05790 AT2G05790 WRKY66 WRKY66
"PDCB3" - Plasmodesmata callose-binding protein 3 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
PDCB3Plasmodesmata callose-binding protein 3 (184 aa)    
Predicted Functional Partners:
ORF111B
Hypothetical protein.[Source-TAIR;Acc-ATMG01180] (111 aa)
           
  0.670
ORF275
Hypothetical protein.[Source-TAIR;Acc-ATMG00670] (275 aa)
           
  0.670
PDLP8
Plasmodesmata-located protein 8; Modulates cell-to-cell trafficking (279 aa)
           
  0.670
AT2G05790
O-Glycosyl hydrolases family 17 protein (472 aa)
     
     
0.585
PDLP6
Plasmodesmata-located protein 6; Modulates cell-to-cell trafficking (288 aa)
           
  0.559
EXPA20
Expansin A20; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found (By similarity) (256 aa)
           
  0.506
BG_PPAP
Beta-1,3-glucanase_putative; Plasmodesmal-associated membrane beta-1,3-glucanase involved in plasmodesmal callose degradation and functions in the gating of plasmodesmata (425 aa)
     
   
  0.499
WRKY66
WRKY DNA-binding protein 66; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (235 aa)
           
  0.474
CSLC5
Cellulose-synthase-like C5; Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (By similarity) (692 aa)
           
  0.450
AT5G12110
Elongation factor 1-beta 1; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (228 aa)
           
  0.448
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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