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AT1G31660 AT1G31660 AT5G15550 AT5G15550 AT3G23620 AT3G23620 RID2 RID2 PUM24 PUM24 AT3G13230 AT3G13230 AT5G06550 AT5G06550 AT4G28450 AT4G28450 AT1G18850 AT1G18850 PWP2 PWP2 PPR596 PPR596
"AT1G18850" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G18850Uncharacterized protein (399 aa)    
Predicted Functional Partners:
PPR596
PENTATRICOPEPTIDE REPEAT 596 (596 aa)
     
        0.853
AT4G28450
WD repeat and SOF domain-containing protein 1 (452 aa)
     
        0.849
PUM24
Pumilio 24; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (641 aa)
     
        0.848
AT3G23620
Ribosome production factor 2-like protein (314 aa)
     
        0.846
PWP2
Periodic tryptophan protein 2 (900 aa)
     
        0.843
AT3G13230
RNA-binding protein PNO1 (215 aa)
     
        0.839
AT5G15550
transducin/WD40 domain-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (433 aa)
     
        0.835
AT5G06550
Uncharacterized protein (502 aa)
     
        0.832
AT1G31660
Putative bystin (444 aa)
     
        0.831
RID2
Root initiation defective 2 (289 aa)
     
        0.828
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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