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FLA11 FLA11 IRX1 IRX1 GLP10 GLP10 CTL2 CTL2 XSP1 XSP1 XCP2 XCP2 PRR1 PRR1 XCP1 XCP1 DMP2 DMP2 TED6 TED6 VND7 VND7
"XCP2" - Xylem cysteine peptidase 2 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
XCP2Xylem cysteine peptidase 2; Probable thiol protease (356 aa)    
Predicted Functional Partners:
XCP1
Xylem cysteine peptidase 1; Probable thiol protease (355 aa)
   
   
0.857
DMP2
Uncharacterized protein (184 aa)
     
        0.820
TED6
Tracheary element differentiation-related 6 (116 aa)
     
   
  0.816
GLP10
Germin-like protein 10; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (220 aa)
     
   
  0.810
CTL2
Chitinase-like protein 2; No chitinase activity (By similarity). Required for proper cell wall biosynthesis in etiolated seedlings. Prevents lignin accumulation in hypocotyls (348 aa)
     
   
  0.805
VND7
Vascular related NAC-domain protein 7; Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5’- (T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3’, in the promoter of target genes (e.g. genes involved in secondary wall biosynthesis, cell wall modification such as xylan accumulation, and programmed cell death) (PubMed-20935069, PubMed-20488898, PubMed-22037706, PubMed-21284754). Involved in xylem formation in roots and shoots, especially regulating protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed-16103 [...] (324 aa)
     
   
  0.801
PRR1
Pinoresinol reductase 1; Reductase involved in lignan biosynthesis. Unlike conventional pinoresinol reductases that can reduce both pinoresinol and lariciresinol, PRR1 shows a strict substrate preference toward pinoresinol. Active on both (+) and (-)- pinoresinol. Abstracts the 4R-hydride from the NADPH cofactor during catalysis (317 aa)
     
   
  0.785
XSP1
Xylem serine peptidase 1 (749 aa)
     
 
  0.768
FLA11
FASCICLIN-like arabinogalactan-protein 11; May be a cell surface adhesion protein (246 aa)
     
   
  0.737
IRX1
IRREGULAR XYLEM 1; Catalytic subunit of cellulose synthase terminal complexes (’rosettes’), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening (985 aa)
     
   
  0.735
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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