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AT4G26630 AT4G26630 LRB3 LRB3 AT1G20940 AT1G20940 AT5G38960 AT5G38960 AT5G36200 AT5G36200 MYB22 MYB22 AT5G05030 AT5G05030 AT3G54550 AT3G54550 AT4G08530 AT4G08530 DOF4.3 DOF4.3 AT4G04580 AT4G04580
"AT1G20940" - F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20940F-box protein (414 aa)    
Predicted Functional Partners:
AT4G26630
DEK domain-containing chromatin associated protein (763 aa)
       
      0.527
MYB22
Myb domain protein 22 (256 aa)
     
        0.438
AT5G38960
RmlC-like cupins superfamily protein; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (221 aa)
     
        0.438
AT5G36200
Putative F-box protein (471 aa)
     
        0.438
AT5G05030
Uncharacterized protein (363 aa)
     
        0.438
DOF4.3
Dof zinc finger protein DOF4.3; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence (232 aa)
     
        0.438
AT4G08530
Non-specific lipid-transfer protein 15; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (103 aa)
     
        0.438
AT4G04580
Myb family transcription factor (166 aa)
     
        0.438
LRB3
Light-response BTB 3; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (505 aa)
     
        0.438
AT3G54550
Uncharacterized protein (288 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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