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LDL3 LDL3 AT5G22760 AT5G22760 LYK3 LYK3 SAB SAB SWEETIE SWEETIE AT1G22060 AT1G22060 RHL1 RHL1 MOR1 MOR1 AT3G45850 AT3G45850 PRP1 PRP1 AT1G65010 AT1G65010
"AT1G22060" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G22060Uncharacterized protein (1999 aa)    
Predicted Functional Partners:
LYK3
LysM type receptor kinase-like protein; Putative Lysin motif (LysM) receptor kinase that may recognize microbe-derived N-acetylglucosamine (NAG)-containing ligands (651 aa)
     
   
  0.754
RHL1
ROOT HAIRLESS 1 (386 aa)
     
   
  0.750
PRP1
Proline-rich protein 1; May contribute to cell wall structure in root hairs (335 aa)
           
  0.743
AT1G65010
Uncharacterized protein (1345 aa)
     
        0.513
AT3G45850
P-loop containing nucleoside triphosphate hydrolase-like protein; Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules (By similarity). Plays an essential role in stabilizing the mitotic spindle. Required during mitotic cytokinesis (By similarity) (1058 aa)
     
        0.489
SAB
SABRE; May be involved in membrane trafficking (By similarity). Required for cell expansion, especially in root cortex, probably by counteracting the action of ethylene in promoting cells radial expansion (PubMed-7867930, PubMed-8275864). Involved in female organ development (PubMed-14675453). Antagonistically interacts with ethylene signaling to regulate plant responses to Pi starvation (PubMed-22615140) (2655 aa)
     
        0.470
SWEETIE
SWEETIE (2223 aa)
     
        0.453
AT5G22760
PHD finger family protein (1566 aa)
     
        0.445
MOR1
MICROTUBULE ORGANIZATION 1; Microtubule-binding protein that is essential for cortical microtubules organization and function. Essential for maintaining the interphase cortical array and for correct morphogenesis. Promotes rapid growth and shrinkage of microtubules and suppresses the pausing of interphase microtubules. Regulates the structure and function of microtubule arrays during mitosis and cytokinesis. Probably not required for cellulose microfibrils alignment in roots (1978 aa)
     
        0.434
LDL3
LSD1-like 3; Probable histone demethylase that reduces the levels of histone H3 ’Lys-4’ methylation in chromatin (1628 aa)
     
        0.426
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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