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NEK5 NEK5 AT3G04700 AT3G04700 AT3G17060 AT3G17060 scpl38 scpl38 EIF4A1 EIF4A1 EIF4A-2 EIF4A-2 AT1G22730 AT1G22730 AT1G72730 AT1G72730 AT1G63660 AT1G63660 AT5G19210 AT5G19210 EMB1586 EMB1586
"AT1G22730" - MA3 domain-containing protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
AT1G22730MA3 domain-containing protein (693 aa)    
Predicted Functional Partners:
AT1G63660
GMP-synthase-C and glutamine amidotransferase domain-containing protein (534 aa)
     
        0.934
AT5G19210
DEAD-box ATP-dependent RNA helicase 58 (472 aa)
     
  0.839
EIF4A1
Translational initiation factor 4A-1 (415 aa)
     
  0.839
AT1G72730
Translation initiation factor 4A-3; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5’-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity) (414 aa)
     
  0.839
EIF4A-2
Eif4a-2; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5’-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity) (412 aa)
     
  0.839
EMB1586
Embryo defective 1586; Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation (551 aa)
     
  0.839
scpl38
Serine carboxypeptidase-like 38; Probable carboxypeptidase (487 aa)
           
  0.710
AT3G17060
Putative pectinesterase 67; Acts in the modification of cell walls via demethylesterification of cell wall pectin (344 aa)
           
  0.678
AT3G04700
Uncharacterized protein (191 aa)
           
  0.678
NEK5
NIMA-related kinase 5; May be involved in plant development processes (427 aa)
           
  0.676
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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