Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
RecQl3 RecQl3 AT1G24240 AT1G24240 ILR2 ILR2 RECQSIM RECQSIM AT1G24290 AT1G24290 DRT101 DRT101 RECQI1 RECQI1 AT1G27880 AT1G27880 RECQL2 RECQL2 RECQ4A RECQ4A RECQ4B RECQ4B
"AT1G24290" - AAA-type ATPase-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G24290AAA-type ATPase-like protein (525 aa)    
Predicted Functional Partners:
DRT101
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P (556 aa)
     
      0.919
AT1G24240
Ribosomal protein L19 family protein (222 aa)
         
  0.881
ILR2
IAA-LEUCINE RESISTANT 2 (386 aa)
           
  0.843
RECQSIM
DNA helicase; Plant specific 3’-5’ DNA helicase that may play a role in the repair of DNA (858 aa)
     
 
  0.838
RecQl3
ATP-dependent DNA helicase Q-like 3; 3’-5’ DNA helicase that may play a role in the repair of DNA. Exhibits an ATP or dATP-dependent DNA-helicase activity. Can not use GTP/dGTP, CTP/dCTP or UTP/dUTP as nucleotide cofactors. Catalyzes DNA strand annealing. On nicked Holliday junctions, unwinds the lagging strand. Can not act on intact Holliday junctions (713 aa)
     
 
  0.838
RECQI1
RECQ helicase l1; 3’-5’ DNA helicase that may play a role in the repair of DNA (606 aa)
     
 
  0.838
RECQ4B
RECQ helicase L4B; 3’-5’ DNA helicase that may play a role in the repair of DNA (By similarity). Required to promote but not to suppress crossovers (1150 aa)
     
 
  0.838
RECQL2
RECQ helicase L2; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (705 aa)
     
 
  0.838
AT1G27880
ATP-dependent DNA helicase Q-like 5; 3’-5’ DNA helicase that may play a role in the repair of DNA (911 aa)
     
 
  0.838
RECQ4A
ATP-dependent DNA helicase Q-like 4A; 3’-5’ DNA helicase that may play a role in the repair of DNA. Required for maintenance of genome stability by modulation of the DNA damage response and repression of crossovers. Confers resistance to genotoxic stress (1188 aa)
     
 
  0.838
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (3%)