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STRINGSTRING
SDH3-1 SDH3-1 MTHSC70-2 MTHSC70-2 SDH3-2 SDH3-2 AT1G23100 AT1G23100 CPN20 CPN20 CPN10 CPN10 Cpn60beta4 Cpn60beta4 AT3G60210 AT3G60210 CHL-CPN10 CHL-CPN10 cpHsc70-2 cpHsc70-2 cpHsc70-1 cpHsc70-1
"Cpn60beta4" - Chaperonin-60beta4 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpn60beta4Chaperonin-60beta4; Involved specifically in the folding of NDHH, a subunit of the chloroplast NADH dehydrogenase-like complex (NDH) (611 aa)    
Predicted Functional Partners:
CPN20
Chaperonin 20; Seems to function only as a co-chaperone, along with cpn60, and in certain cases is essential for the discharge of biologically active proteins from cpn60. Required to activate the iron superoxide dismutases (FeSOD) (253 aa)
 
 
  0.999
AT3G60210
GroES-like family protein (138 aa)
   
 
  0.999
CHL-CPN10
Chloroplast chaperonin 10 (139 aa)
   
 
  0.999
AT1G23100
GroES-like protein (97 aa)
   
 
  0.999
CPN10
Chaperonin 10; Seems to function only as a co-chaperone, along with cpn60, and in certain cases is essential for the discharge of biologically active proteins from cpn60 (98 aa)
   
 
  0.999
SDH3-1
Succinate dehydrogenase 3-1; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (213 aa)
     
 
  0.977
SDH3-2
Succinate dehydrogenase 3-2 (213 aa)
     
 
  0.977
cpHsc70-1
Chloroplast heat shock protein 70-1; Acts redundantly with HSP70-7 in the thermotolerance of germinating seeds. Plays an important role in the protein precursor import into chloroplasts (718 aa)
   
 
  0.977
cpHsc70-2
Heat shock protein 70-2; Acts redundantly with HSP70-6 in the thermotolerance of germinating seeds. Plays an important role in the protein precursor import into chloroplasts (718 aa)
   
 
  0.976
MTHSC70-2
Mitochondrial HSO70 2; In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage (By similarity) (682 aa)
   
 
  0.968
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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