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AT1G53190 AT1G53190 PFA-DSP5 PFA-DSP5 PRMT7 PRMT7 AT1G19720 AT1G19720 AT5G16640 AT5G16640 AT5G08510 AT5G08510 AT3G27200 AT3G27200 AT1G26460 AT1G26460 AT4G35850 AT4G35850 AT1G53645 AT1G53645 AT3G02650 AT3G02650
"AT1G26460" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G26460Pentatricopeptide repeat-containing protein (630 aa)    
Predicted Functional Partners:
AT5G16640
Pentatricopeptide repeat-containing protein (504 aa)
           
  0.910
AT5G08510
Pentatricopeptide repeat-containing protein (511 aa)
           
  0.910
AT1G19720
Pentatricopeptide repeat-containing protein (894 aa)
           
  0.910
AT1G53190
RING/U-box superfamily protein (494 aa)
           
  0.878
PFA-DSP5
Tyrosine specific protein phosphatase family protein (204 aa)
           
  0.848
AT3G27200
Cupredoxin superfamily protein (174 aa)
           
  0.841
PRMT7
Protein arginine methyltransferase 7; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA) (724 aa)
     
   
  0.825
AT1G53645
Hydroxyproline-rich glycoprotein-like protein (523 aa)
     
        0.806
AT4G35850
Pentatricopeptide repeat-containing protein (444 aa)
     
      0.781
AT3G02650
Pentatricopeptide repeat-containing protein (576 aa)
     
        0.761
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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