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DHS DHS XW6 XW6 AT3G58180 AT3G58180 FBR12 FBR12 AT4G17390 AT4G17390 AT3G59540.1 AT3G59540.1 AT4G16720 AT4G16720 SAC52 SAC52 AT2G43460 AT2G43460 AT2G41840 AT2G41840 AT1G58983.1 AT1G58983.1
"FBR12" - FUMONISIN B1-RESISTANT12 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBR12FUMONISIN B1-RESISTANT12; The precise role of eIF-5A in protein biosynthesis is not known but it may function as a bimodular protein capable of binding to both RNA and proteins. Regulates cytokinin-mediated root protoxylem specification and represses secifically the expression of AHP6. Regulates the induction of programmed cell death caused by infection with virulent pathogen (159 aa)    
Predicted Functional Partners:
DHS
Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. Also able to produce homospermidine from putrescine (By similarity) (368 aa)
   
  0.997
AT4G16720
60S ribosomal protein L15-1 (204 aa)
     
   
  0.993
AT4G17390
60S ribosomal protein L15-2 (204 aa)
     
   
  0.993
AT3G59540.1
60S ribosomal protein L38 (69 aa)
     
        0.991
AT3G58180
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (314 aa)
     
  0.989
AT2G43460
60S ribosomal protein L38 (69 aa)
     
        0.988
XW6
40S ribosomal protein S2-1 (284 aa)
     
 
  0.941
AT2G41840
40S ribosomal protein S2-3 (285 aa)
     
 
  0.941
SAC52
SUPPRESSOR OF ACAULIS 52; Ribosomal protein involved in translational regulation (PubMed-18694459). Contribute to general translation under UV-B stress (PubMed-20516338, PubMed-23886624). Involved in the NIK1- mediated defense response to geminivirus infection (PubMed-18789471, PubMed-19112492). Acts coordinately with LIMYB as a transcriptional repressor (PubMed-25707794) (220 aa)
   
   
  0.940
AT1G58983.1
40S ribosomal protein S2-2 (284 aa)
     
 
  0.938
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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