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EMB2763 EMB2763 EMB2730 EMB2730 RAN3 RAN3 RAN4 RAN4 RAN2 RAN2 RAN-1 RAN-1 AT1G27060 AT1G27060 RANGAP1 RANGAP1 AT2G15910 AT2G15910 RANGAP2 RANGAP2 AT3G06000 AT3G06000
"AT1G27060" - Regulator of chromosome condensation-like protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G27060Regulator of chromosome condensation-like protein (386 aa)    
Predicted Functional Partners:
AT2G15910
CSL zinc finger domain-containing protein (367 aa)
     
 
  0.920
RAN3
RAN GTPase 3; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (221 aa)
     
  0.874
RAN4
Ras-related nuclear protein 4; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (222 aa)
     
  0.874
RAN2
GTP-binding nuclear protein Ran-2; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (221 aa)
     
  0.874
RAN-1
RAS-related nuclear protein-1; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (221 aa)
     
  0.874
RANGAP2
RAN GTPase activating protein 2; GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state (545 aa)
     
 
  0.794
RANGAP1
RAN GTPase activating protein 1; GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state. Plays a role in spatial signaling during cell division (535 aa)
     
 
  0.794
AT3G06000
RNI-like superfamily protein (211 aa)
     
 
  0.794
EMB2730
EMBRYO DEFECTIVE 2730; 3’-5’ exoribonuclease that catalyzes 3’ maturation of chloroplast and mitochondrion ribosomal RNAs; degrades short nucleotidic extensions to generate the mature 3’-ends. Involved in the maturation of 23S, 16S and 5S rRNAs (803 aa)
       
 
  0.628
EMB2763
EMBRYO DEFECTIVE 2763; Catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. Required for 5.8S rRNA intermediate processing and the degradation of 5’ external transcribed spacer (5’ ETS), a maturation by-product of rRNA synthesis. Is not involved in the degradation of turnip crinkle virus (TCV) RNA and significant virus resistance (PubMed-24244451). Required for normal development of female gametophytes and early embryogenesis (PubMed-20798041, PubMed-24244451) (1012 aa)
       
 
  0.628
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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