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STRINGSTRING
AT5G64090 AT5G64090 ORF77.2 ORF77.2 AT5G38760 AT5G38760 PDIL1-5 PDIL1-5 NPGR1 NPGR1 VLN1 VLN1 AT5G44530 AT5G44530 EDA7 EDA7 AT3G60420 AT3G60420 AT5G21050 AT5G21050 SBT4.12 SBT4.12
"NPGR1" - No pollen germination related 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPGR1No pollen germination related 1 (694 aa)    
Predicted Functional Partners:
AT5G44530
Subtilase family protein (840 aa)
           
  0.808
SBT4.12
Subtilase 4.12 (736 aa)
           
  0.675
EDA7
Embryo sac development arrest 7 (711 aa)
           
  0.671
PDIL1-5
PDI-like 1-5; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds (537 aa)
           
  0.670
AT3G60420
Phosphoglycerate mutase family protein (350 aa)
           
  0.637
AT5G64090
Uncharacterized protein (448 aa)
       
      0.615
AT5G21050
Uncharacterized protein (355 aa)
       
      0.615
AT5G38760
Late embryogenesis abundant protein (LEA) family protein (67 aa)
           
  0.608
ORF77.2
Protein precursor Ycf15, putative, chloroplast (77 aa)
           
  0.600
VLN1
Villin 1; Binds actin and actin filament bundles in a Ca(2+)/calmodulin-insensitive manner, but is unable to sever, cap, and nucleate actin filament formation in vitro. Does not protect individual filaments from severing by VLN3 (AC O81645) (933 aa)
     
   
  0.581
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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