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SYP31 SYP31 SYP51 SYP51 SYP42 SYP42 SYP71 SYP71 SYP43 SYP43 SYP72 SYP72 SYP73 SYP73 SYP52 SYP52 AT1G27550 AT1G27550 AT1G15930 AT1G15930 KTI1 KTI1
"AT1G27550" - F-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G27550F-box family protein (125 aa)    
Predicted Functional Partners:
SYP72
Syntaxin-72; Vesicle trafficking protein that functions in the secretory pathway (267 aa)
           
  0.740
AT1G15930
40S ribosomal protein S12-1 (144 aa)
           
  0.736
SYP52
Syntaxin-52; Vesicle trafficking protein that functions in the secretory pathway (233 aa)
           
  0.732
SYP73
Syntaxin-73; Vesicle trafficking protein that functions in the secretory pathway (264 aa)
           
  0.670
SYP43
Syntaxin-43; Vesicle trafficking protein that functions in the secretory pathway (331 aa)
           
  0.670
SYP42
Syntaxin-42; Vesicle trafficking protein that functions in the secretory pathway (323 aa)
           
  0.631
SYP51
Syntaxin-51; Vesicle trafficking protein that functions in the secretory pathway (232 aa)
           
  0.602
SYP71
Syntaxin-71; Vesicle trafficking protein that functions in the secretory pathway (266 aa)
           
  0.593
KTI1
Kunitz trypsin inhibitor 1 (215 aa)
           
  0.560
SYP31
Syntaxin-31; Vesicle trafficking protein that functions in the secretory pathway (336 aa)
           
  0.491
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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