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AT1G77525 AT1G77525 TPS4 TPS4 CYP71A23 CYP71A23 AT4G08990 AT4G08990 MEE57 MEE57 AT5G13600 AT5G13600 AT1G71250 AT1G71250 AT1G28500 AT1G28500 AT3G16590 AT3G16590 RGP3 RGP3 AT1G78760 AT1G78760
"AT1G28500" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G28500Uncharacterized protein (326 aa)    
Predicted Functional Partners:
AT5G13600
Phototropic-responsive NPH3 family protein; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (591 aa)
     
        0.438
TPS4
Trehalose-6-phosphatase synthase S4 (795 aa)
     
        0.438
MEE57
Maternal effect embryo arrest 57; Maintains chromatin CpG methylation that plays a role in genomic imprinting, regulation of embryogenesis and seed viability. Required for proper patterns of CG DNA methylation in dividing cells (By similarity). Required during the endosperm development in seeds (1404 aa)
     
        0.438
AT4G08990
DNA (cytosine-5-)-methyltransferase; Maintains chromatin CpG methylation that plays a role in genomic imprinting, regulation of embryogenesis and seed viability. Required for proper patterns of CG DNA methylation in dividing cells (By similarity) (1512 aa)
     
        0.438
CYP71A23
Cytochrome P450 71A23 (483 aa)
     
        0.438
AT3G16590
Putative F-box protein (374 aa)
     
        0.438
RGP3
Reversibly glycosylated polypeptide 3; UDP-L-arabinose mutase involved in the biosynthesis of cell wall non-cellulosic polysaccharides. Catalyzes the interconvertion of UDP-L-arabinopyranose (UDP-Arap) and UDP-L- arabinofuranose (UDP-Araf). Preferentially catalyzes the formation of UDP-Arap from UDP-Araf. At thermodynamic equilibrium in vitro the ratio of the pyranose form over the furanose form is 95-5. Is not active on other UDP-sugars (UDP-Gal, UDP-Xyl, UDP-Glc, GDP-Man and GDP-Fuc). Is probably active as heteromer in vivo (362 aa)
     
        0.438
AT1G78760
F-box/RNI-like superfamily protein (452 aa)
     
        0.438
AT1G77525
Uncharacterized protein (79 aa)
     
        0.438
AT1G71250
GDSL esterase/lipase (374 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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