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AT1G48590 AT1G48590 SLAH2 SLAH2 COR27 COR27 CYP71A20 CYP71A20 SRD2 SRD2 AT1G73580 AT1G73580 EHB1 EHB1 RKD1 RKD1 RPD1 RPD1 RID2 RID2 RID3 RID3
"SRD2" - SHOOT REDIFFERENTIATION DEFECTIVE 2 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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SRD2SHOOT REDIFFERENTIATION DEFECTIVE 2; Transcription activator of small-nuclear RNA genes (snRNA), which have essential roles in pre-mRNA splicing and rRNA processing. Essential protein involved in the establishment of apical meristems and organ primordia, embryogenesis, cell differentiation and cell proliferation, probably by modulating the establishment of auxin gradients. Participates in the control of competence in cell proliferation; required for the reinitiation of the progression of the cell cycle and subsequent cell proliferation during cell redifferentiation leading to callus fo [...] (386 aa)    
Predicted Functional Partners:
RPD1
ROOT PRIMORDIUM DEFECTIVE 1; Involved in pre-arranging the maintenance of the active cell proliferation during root primordium development. Does not seem to be involved in cell cycle progression (409 aa)
     
   
  0.718
RID2
Root initiation defective 2 (289 aa)
           
  0.679
RID3
ROOT INITIATION DEFECTIVE 3; Involved in meristem development. Acts as negative regulator of the CUC-STM pathway in shoot apical meristem (SAM) neo-formation (438 aa)
           
  0.673
CYP71A20
Cytochrome P450 71A20 (497 aa)
           
  0.670
AT1G48590
Calcium-dependent lipid-binding domain; Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (PubMed-25465408) (200 aa)
           
  0.670
COR27
Cold regulated gene 27 (246 aa)
           
  0.631
SLAH2
SLAC1 homologue 2; Slow, weak voltage-dependent S-type anion efflux channel involved in maintenance of anion homeostasis (519 aa)
           
  0.609
RKD1
RWP-RK domain containing 1; Putative transcription factor (269 aa)
           
  0.604
AT1G73580
C2 domain-containing protein; Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity) (168 aa)
           
  0.603
EHB1
ENHANCED BENDING 1; Stimulates the GTPase/ATPase activities of Obg-like ATPases (By similarity). Mediates the transient calcium-dependent interaction of PYR/PYL/RCAR abscisic acid (ABA) receptors with the plasma membrane and thus regulates ABA sensitivity (By similarity). Prevents hypocotyl bending as well as gravitropic response under blue light conditions (PubMed-21367967) (174 aa)
           
  0.553
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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