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LSU4 LSU4 NBR1 NBR1 EIL3 EIL3 LSU1 LSU1 LSU2 LSU2 AT1G29120 AT1G29120 AT5G02660 AT5G02660 AT5G14890 AT5G14890 AT3G61680 AT3G61680 AT1G18360 AT1G18360 AT3G14075 AT3G14075
"AT1G29120" - Hydrolase-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29120Hydrolase-like protein (456 aa)    
Predicted Functional Partners:
LSU4
RESPONSE TO LOW SULFUR 4 (92 aa)
           
  0.922
LSU1
RESPONSE TO LOW SULFUR 1 (94 aa)
           
  0.703
LSU2
RESPONSE TO LOW SULFUR 2 (94 aa)
       
 
  0.688
AT5G02660
Uncharacterized protein (629 aa)
           
  0.638
NBR1
Next to BRCA1 gene 1; Autophagic substrate degraded in the vacuole by non- selective autophagy. Requires ATG8 protein expression to be recognized as an autophagic substrate (PubMed-21606687). Acts probably as a receptor for autophagosomal degradation of ubiquitinated proteins. Targets ubiquitinated protein aggregates derived from denatured or damaged non-native proteins generated under stress conditions (PubMed-23341779). Functions additively with the E3 ubiquitin-protein ligase CHIP for autophagosomal degradation of proteotoxic agregates formed under stress conditions (PubMed-24497840) (704 aa)
           
  0.635
EIL3
ETHYLENE-INSENSITIVE3-like 3; Probable transcription factor that may be involved in the ethylene response pathway (567 aa)
           
  0.630
AT1G18360
alpha/beta-Hydrolases superfamily protein (382 aa)
           
  0.608
AT5G14890
NHL domain-containing protein (754 aa)
           
  0.603
AT3G61680
Lipase class 3 family protein (649 aa)
           
  0.603
AT3G14075
Lipase class 3 family protein (642 aa)
           
  0.603
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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