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AT5G50530 AT5G50530 rpl5 rpl5 AT4G09200 AT4G09200 AT3G62470 AT3G62470 AT5G09460 AT5G09460 AT2G07751 AT2G07751 SAC51 SAC51 AT1G29950 AT1G29950 AT2G07728 AT2G07728 CPUORF7 CPUORF7 EMB1444 EMB1444
"AT1G29950" - Basic helix-loop-helix in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G29950Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (251 aa)    
Predicted Functional Partners:
AT5G09460
Transcription factor bHLH143 (326 aa)
     
   
  0.828
SAC51
SUPPRESSOR OF ACAULIS 51; Transcription factor. Involved in stem elongation, probably by regulating a subset of genes involved in this process (348 aa)
     
   
  0.738
EMB1444
EMBRYO DEFECTIVE 1444; Transcription factor that may regulate root development (1322 aa)
     
   
  0.714
CPUORF7
Uncharacterized protein; Transcription factor that may regulate root development (737 aa)
     
   
  0.658
AT5G50530
CBS / octicosapeptide/Phox/Bemp1 domain-containing protein (548 aa)
     
        0.553
AT4G09200
SPla/RYanodine receptor (SPRY) domain-containing protein (397 aa)
     
        0.553
AT3G62470
Pentatricopeptide repeat-containing protein (599 aa)
     
        0.553
AT2G07751
NADH dehydrogenase I subunit 3; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (118 aa)
     
        0.553
AT2G07728
Uncharacterized protein (286 aa)
     
        0.553
rpl5
60S ribosomal protein L5 (185 aa)
     
        0.553
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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