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STRINGSTRING
AT5G51280 AT5G51280 PGL5 PGL5 PGL4 PGL4 AT1G70820 AT1G70820 AT5G17530 AT5G17530 AT1G30540 AT1G30540 PGL2 PGL2 EMB2024 EMB2024 DRT101 DRT101 PGL1 PGL1 GNA1 GNA1
"AT1G30540" - Actin-like ATPase superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G30540Actin-like ATPase superfamily protein (351 aa)    
Predicted Functional Partners:
GNA1
Glucose-6-phosphate acetyltransferase 1; Acetyltransferase involved in UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthesis. UDP-GlcNAc is an essential metabolite that serves as an initial sugar donor for N-glycan synthesis and thus plays an important role in protein and lipid glycosylation (149 aa)
   
 
  0.762
PGL5
6-phosphogluconolactonase 5; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate (252 aa)
       
  0.737
PGL4
6-phosphogluconolactonase 4; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate (261 aa)
       
  0.737
EMB2024
EMBRYO DEFECTIVE 2024; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate (325 aa)
       
  0.737
PGL2
6-phosphogluconolactonase 2; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate (259 aa)
       
  0.737
PGL1
6-phosphogluconolactonase 1; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate (268 aa)
       
  0.737
DRT101
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P (556 aa)
     
 
  0.567
AT5G17530
Phosphoglucosamine mutase family protein (614 aa)
     
 
  0.557
AT1G70820
Phosphoglucomutase-like protein (615 aa)
     
 
  0.557
AT5G51280
DEAD-box protein abstrakt, putative (591 aa)
       
      0.487
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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