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AT3G63090 AT3G63090 DIM1B DIM1B DIM1A DIM1A AT2G40480 AT2G40480 AT1G30960 AT1G30960 AT1G22040 AT1G22040 AT5G39960 AT5G39960 AT1G27430 AT1G27430 PPR596 PPR596 EMB3147 EMB3147 PFC1 PFC1
"AT1G30960" - GTP-binding protein ERG in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G30960GTP-binding protein ERG; Has a crucial role in plant growth and development, possibly by influencing mitochondrial division (437 aa)    
Predicted Functional Partners:
AT5G39960
GTP-binding protein (621 aa)
 
   
  0.802
AT1G22040
F-box/kelch-repeat protein (475 aa)
           
  0.772
AT3G63090
Ubiquitin carboxyl-terminal hydrolase-like protein (404 aa)
     
   
  0.748
AT2G40480
Uncharacterized protein (518 aa)
           
  0.738
AT1G27430
GYF domain-containing protein (1492 aa)
           
  0.738
DIM1B
Adenosine dimethyl transferase 1B; N6-adenine methyltransferase which modifies the AA dinucleotide at the plant mitochondrial 18S rRNA nucleotides A1914 and A1915. Not active as mitochondrial transcription factor (380 aa)
     
 
  0.737
DIM1A
Dimethyladenosine transferase; N6-adenine methyltransferase which modifies the AA dinucleotide at the plant nuclear 18S rRNA nucleotides A1785 and A1786 (PubMed-22829145). Required for generating appropriate patterns of gene expression during root development, including the cell-specific expression of transcriptional regulators involved in root hair and non-hair cells patterning (PubMed-22829145) (353 aa)
     
 
  0.737
PFC1
PALEFACE 1; Required for methylation of the 3’ adenosines in the small subunit of plastid rRNA. Essential for chloroplast biogenesis at low temperatures (343 aa)
     
 
  0.737
PPR596
PENTATRICOPEPTIDE REPEAT 596 (596 aa)
     
        0.699
EMB3147
EMBRYO DEFECTIVE 3147 (393 aa)
     
      0.694
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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