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STRINGSTRING
AT1G43100 AT1G43100 AT2G22802 AT2G22802 AT4G08073 AT4G08073 AT3G47920 AT3G47920 AT4G05612 AT4G05612 AT1G36095 AT1G36095 AT1G31835 AT1G31835 AT2G07981 AT2G07981 AT2G10340 AT2G10340 AT5G03710 AT5G03710 AT2G07363 AT2G07363
"AT1G31835" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G31835Uncharacterized protein (76 aa)    
Predicted Functional Partners:
AT4G08073
Uncharacterized protein (60 aa)
     
        0.438
AT4G05612
Uncharacterized protein (428 aa)
     
        0.438
AT3G47920
Uncharacterized protein (300 aa)
     
        0.438
AT2G10340
Uncharacterized protein (85 aa)
     
        0.438
AT2G07981
Uncharacterized protein (413 aa)
     
        0.438
AT5G03710
Uncharacterized protein (81 aa)
     
        0.437
AT2G22802
Uncharacterized protein (32 aa)
     
        0.437
AT2G07363
Uncharacterized protein (49 aa)
     
        0.437
AT1G43100
Pectin lyase-like superfamily protein (444 aa)
     
        0.436
AT1G36095
DNA binding (301 aa)
     
        0.436
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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