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AT1G63290 AT1G63290 AT3G01850 AT3G01850 RSW10 RSW10 RPE RPE PRK PRK SBPASE SBPASE RBCS1A RBCS1A GAPB GAPB RCA RCA RBCL RBCL GAPA GAPA
"PRK" - Phosphoribulokinase in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PRKPhosphoribulokinase (395 aa)    
Predicted Functional Partners:
RPE
D-ribulose-5-phosphate-3-epimerase (281 aa)
   
 
  0.990
GAPA
Glyceraldehyde-3-phosphate dehydrogenase A; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3-diphosphoglycerate by NADPH (By similarity) (396 aa)
   
 
  0.989
SBPASE
Sedoheptulose-bisphosphatase (393 aa)
     
   
  0.986
RBCL
Ribulose-bisphosphate carboxylases.[Source-TAIR;Acc-ATCG00490]; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (479 aa)
       
  0.983
RSW10
RADIAL SWELLING 10; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (267 aa)
     
 
  0.977
AT3G01850
Ribulose-phosphate 3-epimerase (225 aa)
   
 
  0.975
AT1G63290
Aldolase-type TIM barrel family protein (227 aa)
   
 
  0.975
RBCS1A
Ribulose bisphosphate carboxylase small chain 1A; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity) (180 aa)
   
 
  0.975
GAPB
Glyceraldehyde-3-phosphate dehydrogenase B; Involved in the photosynthetic reductive pentose phosphate pathway (Calvin-Benson cycle). Catalyzes the reduction of 1,3-diphosphoglycerate by NADPH (By similarity) (447 aa)
   
   
  0.973
RCA
Rubisco activase; Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure (474 aa)
   
   
  0.972
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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