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CID5 CID5 AT4G14270 AT4G14270 CID4 CID4 CID6 CID6 CID3 CID3 PUR4 PUR4 CID11 CID11 AT3G26560 AT3G26560 AT5G14610 AT5G14610 AT4G02840 AT4G02840 AT5G42220 AT5G42220
"CID11" - CTC-interacting domain 11 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CID11CTC-interacting domain 11 (406 aa)    
Predicted Functional Partners:
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
     
 
  0.944
CID4
CTC-interacting domain 4 (595 aa)
     
 
  0.933
PUR4
Purine biosynthesis 4; Essential to the male gametophyte development. Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1407 aa)
     
      0.930
CID3
CTC-interacting domain 3 (587 aa)
       
 
  0.919
AT4G02840
Small nuclear ribonucleoprotein family protein (126 aa)
       
 
  0.912
AT4G14270
Polyadenylate-binding protein-interacting protein 2 (143 aa)
           
  0.911
AT5G14610
DEAD box RNA helicase family protein (712 aa)
   
 
  0.891
CID5
CTC-interacting domain 5; Promotes polyploidy in dark-grown seedlings. Regulates the endocycle leading to hypocotyl elongation (155 aa)
           
  0.877
CID6
CTC-interacting domain 6 (175 aa)
           
  0.849
AT5G42220
Ubiquitin family protein (879 aa)
       
 
  0.807
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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