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STRINGSTRING
KING1 KING1 AT5G16880 AT5G16880 ACX4 ACX4 ARI5 ARI5 HGO HGO AT1G33050 AT1G33050 AT1G15740 AT1G15740 AT1G05840 AT1G05840 AT5G63190 AT5G63190 ML2 ML2 AT3G10770 AT3G10770
"AT1G33050" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G33050Uncharacterized protein (693 aa)    
Predicted Functional Partners:
ARI5
ARIADNE 5 (594 aa)
     
        0.682
AT5G63190
MA3 domain-containing protein (702 aa)
     
        0.651
HGO
Homogentisate 1,2-dioxygenase (461 aa)
     
        0.605
ML2
MEI2-like 2; Probable RNA-binding protein that plays a role in meiosis and vegetative growth (843 aa)
     
        0.586
AT5G16880
Target of Myb protein 1 (407 aa)
     
        0.574
AT1G05840
Aspartyl protease-like protein (485 aa)
     
        0.570
ACX4
acyl-CoA oxidase 4; Catalyzes the desaturation of short-chain acyl-CoAs to 2-trans-enoyl-CoAs. Active on butyryl-CoA (C4), hexanoyl-CoA (C6), and octanoyl-CoA (C8). Has no activity as acyl-CoA dehydrogenase or on crotonyl-CoA (an unsaturated C4-1 carbocyclic ester) or glutaryl-CoA (a dicarboxylic ester) (436 aa)
     
        0.512
KING1
SNF1-related protein kinase regulatory subunit gamma 1; Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase (424 aa)
     
        0.480
AT1G15740
Leucine-rich repeat family protein (585 aa)
     
        0.479
AT3G10770
Single-stranded nucleic acid binding R3H protein (333 aa)
     
        0.447
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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