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AT4G11160 AT4G11160 UKL2 UKL2 AT4G34730 AT4G34730 AT1G76810 AT1G76810 TOPII TOPII P5CS2 P5CS2 P5CS1 P5CS1 AT1G76820 AT1G76820 AT2G27700 AT2G27700 AT1G33090 AT1G33090 AT2G30600 AT2G30600
"AT1G33090" - MATE efflux family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G33090MATE efflux family protein (494 aa)    
Predicted Functional Partners:
AT2G30600
BTB/POZ domain-containing protein (855 aa)
           
  0.563
TOPII
Topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1473 aa)
         
  0.491
UKL2
Uridine kinase-like 2; Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure (483 aa)
   
   
  0.483
P5CS2
Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (726 aa)
         
  0.467
P5CS1
Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (717 aa)
         
  0.467
AT4G34730
Ribosome-binding factor A (215 aa)
              0.454
AT4G11160
Translation initiation factor IF-2 (743 aa)
              0.454
AT2G27700
Putative translation initiation factor IF-2 (480 aa)
              0.454
AT1G76820
Translation initiation factor eIF-5B (1166 aa)
              0.454
AT1G76810
Translation initiation factor eIF-5B (1294 aa)
              0.454
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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