Full Link:
STRINGSTRING
SOG1 SOG1 EMS1 EMS1 SPL SPL AT3G61723 AT3G61723 SDS SDS AT1G33420 AT1G33420 HAT3.1 HAT3.1 SWI1 SWI1 AT5G05110 AT5G05110 CLE18 CLE18 GLY2 GLY2
"AT1G33420" - PHD finger protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G33420PHD finger protein (697 aa)    
Predicted Functional Partners:
AT5G05110
Cysteine proteinase inhibitor 7; Specific inhibitor of cysteine proteinases. Probably involved in the regulation of endogenous processes and in defense against pests and pathogens (By similarity) (232 aa)
           
  0.635
CLE18
CLAVATA3/ESR-RELATED 18; Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance (101 aa)
           
  0.634
HAT3.1
Homeobox protein HAT3.1; Binds only to large DNA fragments. Recognizes a DNA fragment carrying 8 copies of box7 motif of the light-induced cab- E promoter of Nicotiana plumbaginifolia. Also recognizes the box7m1 motif (723 aa)
     
   
  0.619
SOG1
NAC domain-containing protein 8 (449 aa)
     
   
  0.601
EMS1
EXCESS MICROSPOROCYTES1; Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development (1192 aa)
           
  0.475
SWI1
SWITCH1; Required for fertility. Involved in chromatid cohesion establishment, in chromosome structure during male and female meiosis (e.g. the synapse formation between homologous chromosomes, the recombination, and the cohesion of both chromatid arm and centromere), and in axial element formation. Regulates the switch from mitosis to the reductional meiosis division of megaspores prior to the female gametogenesis (megasporogenesis) (639 aa)
           
  0.470
GLY2
Hydroxyacylglutathione hydrolase cytoplasmic; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (258 aa)
           
  0.470
AT3G61723
PHD finger protein (73 aa)
           
  0.450
SPL
SPOROCYTELESS; Transcriptional regulator of sporocyte development (PubMed-10465788). Acts as an adapter-like transcriptional repressor recruiting TPL/TPR corepressors to inhibit TCP transcription factors (PubMed-25378179). Required for nucellus and embryo sac development (PubMed-10500234). Plays a central role in patterning both the proximal-distal and the adaxial-abaxial axes during ovule development (PubMed-12183381). Involved in establishing the prospective chalaza of the ovule and in controlling the cell number and the length of the funiculus, and is r equired for the development o [...] (314 aa)
           
  0.446
SDS
cyclin-SDS; Meiosis-specific cyclin. Required for normal homolog synapsis and recombination in early to mid-prophase 1. May regulate the timing of sister chromatid separation (578 aa)
     
   
  0.439
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (2%)