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AT2G44640 AT2G44640 AT3G32930 AT3G32930 AT5G08540 AT5G08540 RPL24 RPL24 AT5G03900 AT5G03900 AT4G13590 AT4G13590 AT1G33810 AT1G33810 PRPL35 PRPL35 emb2458 emb2458 AT3G10840 AT3G10840 AT3G02900 AT3G02900
"AT1G33810" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G33810Uncharacterized protein (138 aa)    
Predicted Functional Partners:
AT2G44640
Uncharacterized protein (451 aa)
     
   
  0.678
AT3G10840
alpha/beta-Hydrolases superfamily protein (466 aa)
     
   
  0.661
AT3G32930
Uncharacterized protein (249 aa)
     
   
  0.652
AT3G02900
Uncharacterized protein (162 aa)
     
   
  0.648
AT4G13590
Uncharacterized protein (359 aa)
     
   
  0.646
PRPL35
Ribosomal protein L35 (145 aa)
     
        0.642
AT5G08540
Uncharacterized protein (346 aa)
     
   
  0.635
AT5G03900
Iron-sulfur assembly-like protein (523 aa)
           
  0.631
RPL24
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (By similarity). Required for optimal plastid performance in terms of photosynthesis and growth. Required for the translation of plastid mRNAs. Plays a critical role in biosynthesis of thylakoid membrane proteins encoded by chloroplast genes (PubMed-22900828) (198 aa)
     
        0.627
emb2458
Embryo defective 2458; Required for plastid development during embryogenesis (PubMed-24964212). Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex (Probable) (1320 aa)
     
   
  0.608
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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