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STRINGSTRING
AT4G08510 AT4G08510 AT3G09100 AT3G09100 EMF2 EMF2 UBP5 UBP5 SDG2 SDG2 UBP16 UBP16 AT1G36990 AT1G36990 G2484-1 G2484-1 EIF4G EIF4G AT3G48060 AT3G48060 AT3G61690 AT3G61690
"AT1G36990" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G36990Uncharacterized protein (581 aa)    
Predicted Functional Partners:
UBP16
Ubiquitin-specific protease 16; Recognizes and hydrolyzes the peptide bond at the C- terminal Gly of ubiquitin. Involved in the processing of poly- ubiquitin precursors as well as that of ubiquitinated proteins. Involved in salt tolerance by modulating sodium transport activity and repressing cell death at least partially through modulating SHM1 stability and activity (PubMed-23232097). Involved in cadmium tolerance by interacting with HIPP27 and probably modulating its stability (PubMed-23857362) (1008 aa)
     
        0.438
G2484-1
G2484-1 protein (2037 aa)
     
        0.437
AT3G48060
BAH and TFIIS domain-containing protein (1611 aa)
     
        0.437
AT3G61690
Nucleotidyltransferase (1303 aa)
     
        0.436
EMF2
EMBRYONIC FLOWER 2; Polycomb group (PcG) protein. Involved in flowering processes by repressing unknown target genes and preventing reproductive development. Participates in polycomb group (PcG) protein complex-mediated (probably in complex with EMF1) silencing of the flower homeotic genes AGAMOUS (AG), PISTILLATA (PI), and APETALA3 (AP3), as well as of some regulatory genes such as ABSCISIC ACID INSENSITIVE3 (ABI3), LONG VEGETATIVE PHASE1 (LOV1), and FLOWERING LOCUS C (FLC) during vegetative development, by mediating trimethylation of histone 3 lysine 27 on the AG chromatin (H3K27me3) [...] (631 aa)
     
        0.436
SDG2
SET domain protein 2; Histone methyltransferase specifically required for trimethylation of ’Lys-4’ of histone H3 (H3K4me3) and is crucial for both sporophyte and gametophyte development (PubMed-21037105, PubMed-20937886) (2335 aa)
     
        0.436
AT4G08510
Uncharacterized protein (551 aa)
     
     
0.436
EIF4G
Translation initiation factor eIF-4F; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Plays a role in the accumulation of some potyvirus during viral infection. Required for the accumulation of cucumber mosaic virus 3a protein and turnip crinkle virus p28 replication protein during viral infection. These proteins are necessary for cell-to-cell movement of the virus (1727 aa)
     
        0.436
AT3G09100
mRNA capping enzyme-like protein (672 aa)
     
        0.436
UBP5
Ubiquitin-specific protease 5; Recognizes and hydrolyzes the peptide bond at the C- terminal Gly of ubiquitin. Involved in the processing of poly- ubiquitin precursors as well as that of ubiquitinated proteins (924 aa)
     
        0.436
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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