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AT5G61370 AT5G61370 At3g14050 At3g14050 AT5G25630 AT5G25630 AT4G34920 AT4G34920 AT4G34910 AT4G34910 AT5G02860 AT5G02860 AT4G36680 AT4G36680 AT1G43040 AT1G43040 AT3G60980 AT3G60980 AT1G74750 AT1G74750 AT4G20880 AT4G20880
"AT1G43040" - Putative auxin-responsive protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G43040Putative auxin-responsive protein (104 aa)    
Predicted Functional Partners:
AT5G61370
Pentatricopeptide repeat-containing protein (487 aa)
           
  0.489
AT4G36680
Pentatricopeptide repeat-containing protein (412 aa)
           
  0.489
AT4G34920
PLC-like phosphodiesterases superfamily protein (318 aa)
           
  0.489
AT1G74750
Pentatricopeptide repeat-containing protein (855 aa)
           
  0.489
AT3G60980
Pentatricopeptide repeat-containing protein (412 aa)
           
  0.477
AT5G25630
Pentatricopeptide repeat-containing protein (599 aa)
           
  0.476
AT4G34910
DEAD-box ATP-dependent RNA helicase 16 (626 aa)
           
  0.474
AT5G02860
Pentatricopeptide repeat-containing protein (819 aa)
           
  0.449
AT4G20880
Ethylene-responsive/regulated nuclear protein (405 aa)
           
  0.449
At3g14050
RELA/SPOT homolog 2; Possesses ppGpp (guanosine 3’-diphosphate 5’- diphosphate) synthetase activity in vitro and is able to functionally complement E.coli relA mutants. May be involved in a rapid plant ppGpp-mediated response to pathogens and other stresses (709 aa)
           
  0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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