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AT4G30680 AT4G30680 eIF4E3 eIF4E3 AT1G62410 AT1G62410 EIF4E EIF4E AT1G18070 AT1G18070 LSP1 LSP1 AT1G29550 AT1G29550 AT1G45100 AT1G45100 eIFiso4G1 eIFiso4G1 AT4G21110 AT4G21110 CID4 CID4
"AT1G45100" - RNA recognition motif-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G45100RNA recognition motif-containing protein (497 aa)    
Predicted Functional Partners:
AT1G18070
G1 to S phase transition protein (543 aa)
     
 
  0.956
AT1G29550
Translation initiation factor eIF-4E; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (240 aa)
     
  0.840
eIFiso4G1
MIF4G domain and MA3 domain-containing protein; Plays a role in the accumulation of some potyvirus during viral infection (780 aa)
     
  0.837
AT4G30680
Initiation factor eIF-4 gamma, MA3 (263 aa)
     
  0.837
AT1G62410
MIF4G domain-containing protein (223 aa)
     
  0.837
LSP1
Translation initiation factor 4E-2; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (198 aa)
     
  0.837
EIF4E
Translation initiation factor eIF-4E; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (235 aa)
     
  0.837
eIF4E3
Translation initiation factor eIF-4E; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Recognizes and binds the 7-methylguanosine- containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (By similarity) (300 aa)
     
  0.837
AT4G21110
G10 family protein (145 aa)
       
      0.837
CID4
CTC-interacting domain 4 (595 aa)
     
 
  0.797
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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