Full Link:
STRINGSTRING
AT4G35610 AT4G35610 DAZ3 DAZ3 AT4G29950 AT4G29950 AT5G57210 AT5G57210 AT2G19240 AT2G19240 TLP6 TLP6 SK11 SK11 ASK13 ASK13 RNR1 RNR1 TSO2 TSO2 RNR2A RNR2A
"TLP6" - Member of TLP family in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLP6Member of TLP family (413 aa)    
Predicted Functional Partners:
AT5G57210
Microtubule-associated protein-related protein (737 aa)
       
 
  0.598
AT4G29950
RabGAP/TBC domain-containing protein (828 aa)
       
 
  0.598
AT2G19240
RabGAP/TBC domain-containing protein (840 aa)
       
 
  0.598
RNR1
Ribonucleotide reductase 1; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. R1 contains the binding sites for both substrates and allosteric effectors and carries out the actual reduction of the ribonucleotide. Ribonucleotide reductase (RNR) complex function is essential for efficient organellar DNA degradation in pollen. Involved in chloroplast division (816 aa)
           
  0.596
TSO2
TSO MEANING ’UGLY’ IN CHINESE 2; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. Involved in DNA damage repair and programmed cell death inhibition (332 aa)
       
      0.570
RNR2A
Ribonucleotide reductase 2A; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (341 aa)
       
      0.570
SK11
SKP1-like 11; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity). Plays a role during early flowers reproductive development (152 aa)
       
      0.540
ASK13
SKP1-like 13; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (154 aa)
       
      0.540
DAZ3
DUO1-activated zinc finger 3 (275 aa)
     
      0.465
AT4G35610
Zinc finger (C2H2 type) family protein (271 aa)
     
      0.465
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (1%)