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STRINGSTRING
AT3G06090 AT3G06090 AT5G43066 AT5G43066 AT4G37290 AT4G37290 AT4G37295 AT4G37295 AT5G05300 AT5G05300 AT1G49800 AT1G49800 CEP1 CEP1 AT4G28460 AT4G28460 AT1G47485 AT1G47485 CEP3 CEP3 CEP2 CEP2
"AT1G47485" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G47485Uncharacterized protein (91 aa)    
Predicted Functional Partners:
CEP1
Cysteine endopeptidase 1; Involved in the final stage of developmental programmed cell death and in intercalation of new cells. Cleaves extensins, thus probably supporting the final cell collapse (361 aa)
           
  0.810
CEP3
Cysteine endopeptidase 3; Involved in the final stage of developmental programmed cell death and in intercalation of new cells. Cleaves extensins, thus probably supporting the final cell collapse (364 aa)
           
  0.780
AT1G49800
Uncharacterized protein (108 aa)
     
   
  0.732
CEP2
Cysteine endopeptidase 2; Involved in the final stage of developmental programmed cell death and in intercalation of new cells. Cleaves extensins, thus probably supporting the final cell collapse (361 aa)
           
  0.675
AT5G05300
Uncharacterized protein (102 aa)
           
  0.632
AT5G43066
Uncharacterized protein (74 aa)
           
  0.602
AT4G37295
Uncharacterized protein (86 aa)
           
  0.602
AT4G37290
Uncharacterized protein (84 aa)
           
  0.602
AT4G28460
Uncharacterized protein (72 aa)
           
  0.602
AT3G06090
Uncharacterized protein (79 aa)
           
  0.602
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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