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AT5G56800 AT5G56800 PROPEP2 PROPEP2 AT1G47730 AT1G47730 OSB1 OSB1 ORF262 ORF262 ORF131 ORF131 OSB4 OSB4 MSH1 MSH1 OSB3 OSB3 PTAC9 PTAC9 ORF315 ORF315
"AT1G47730" - Putative F-box protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
AT1G47730Putative F-box protein (391 aa)    
Predicted Functional Partners:
OSB3
Protein OSB3; Binds single-stranded DNA (442 aa)
           
  0.865
ORF315
ATP synthase subunit C family protein (315 aa)
           
  0.809
ORF262
ATP synthase 9 mitochondrial (262 aa)
           
  0.801
PTAC9
Protein OSB2; Binds preferentially single-stranded DNA. Does not bind to RNA (371 aa)
           
  0.738
ORF131
Hypothetical protein.[Source-TAIR;Acc-ATMG00050] (131 aa)
           
  0.710
OSB4
Protein OSB4; Binds single-stranded DNA (360 aa)
           
  0.709
OSB1
Protein OSB1; Regulates mitochondrial DNA recombination. Represses homologous recombination, preventing mitochondrial genome instability and unbalanced transmission of alternative mtDNA configurations. Binds preferentially single-stranded DNA. Does not bind to RNA (261 aa)
           
  0.610
PROPEP2
Elicitor peptide 2; Elicitor of plant defense (109 aa)
           
  0.474
MSH1
MUTL protein homolog 1; DNA mismatch repair protein specifically involved in maintenance of mitochondrial genome configuration by controlling specific rearranged portion. Functions by suppressing asymmetric recombination at some repeat pairs (1118 aa)
           
  0.444
AT5G56800
FBD and LRR domain-containing protein (344 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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