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STRINGSTRING
AT5G39120 AT5G39120 AT1G26240 AT1G26240 GLIP3 GLIP3 AT4G33710 AT4G33710 AT5G39110 AT5G39110 AT4G33720 AT4G33720 AT2G29150 AT2G29150 AT1G48325 AT1G48325 AT3G07380 AT3G07380 AT4G26630 AT4G26630
"AT1G48325" - Expressed protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G48325Expressed protein (82 aa)    
Predicted Functional Partners:
AT4G26630
DEK domain-containing chromatin associated protein (763 aa)
       
      0.527
AT4G33720
Putative pathogenesis-related protein (163 aa)
     
        0.438
AT5G39120
RmlC-like cupins superfamily protein; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (221 aa)
     
        0.437
AT5G39110
RmlC-like cupins superfamily protein; May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved (222 aa)
     
        0.437
AT1G26240
Proline-rich extensin-like family protein (478 aa)
     
        0.436
AT4G33710
Putative pathogenesis-related protein (166 aa)
     
        0.435
AT2G29150
Tropine dehydrogenase; Enantiospecific reductase active on cyclic monoterpenes and small flexible lipophilic carbonyls. No activity with tropinone, nitrogen-containing tropinone analogs, tropine or pseudotropine as substrate (268 aa)
     
        0.435
AT3G07380
Uncharacterized protein (102 aa)
     
        0.428
GLIP3
GDSL-motif lipase 3 (367 aa)
     
        0.428
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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