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AT1G43665 AT1G43665 AT4G10895 AT4G10895 AT3G17480 AT3G17480 AT1G33020 AT1G33020 AT3G21170 AT3G21170 SK15 SK15 AT1G77830 AT1G77830 AT1G50800 AT1G50800 AT5G56430 AT5G56430 AT3G05450 AT3G05450 AT1G58766 AT1G58766
"AT1G50800" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G50800Uncharacterized protein (227 aa)    
Predicted Functional Partners:
AT3G05450
Uncharacterized protein (440 aa)
     
        0.438
AT5G56430
FBD-associated F-box protein (360 aa)
     
        0.437
SK15
SKP1-like 15; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (177 aa)
     
        0.436
AT3G21170
F-box and associated interaction domain-containing protein (394 aa)
     
        0.435
AT3G17480
F-box and associated interaction domain-containing protein (373 aa)
     
        0.434
AT1G43665
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (123 aa)
     
        0.428
AT4G10895
Self-incompatibility S1 family protein (141 aa)
     
        0.417
AT1G58766
B-block binding subunit of TFIIIC (1729 aa)
     
        0.415
AT1G77830
RING/U-box superfamily protein (185 aa)
     
        0.414
AT1G33020
F-box and associated interaction domain-containing protein (548 aa)
     
        0.412
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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