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AT5G44520 AT5G44520 EMB3119 EMB3119 THO1 THO1 AT1G50970 AT1G50970 POK POK RSW10 RSW10 AT1G71300 AT1G71300 RPI2 RPI2 AT4G02030 AT4G02030 VPS54 VPS54 AT2G27900 AT2G27900
"AT1G50970" - Membrane trafficking VPS53-like protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G50970Membrane trafficking VPS53-like protein; Involved in retrograde transport from early and late endosomes to late Golgi, leading to the membrane fusion between late Golgi and endosomal vesicles (569 aa)    
Predicted Functional Partners:
VPS54
Protein VPS54; Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi (By similarity). Probably involved in pollen tube elongation and other polar growth (1034 aa)
     
  0.988
POK
POKY POLLEN TUBE; Acts as component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex facilitates tethering as well as SNARE complex assembly at the Golgi (By similarity). Required for pollen tube elongation and other polar growth (707 aa)
     
  0.984
AT1G71300
Vps52 / Sac2 family ; May be involved in retrograde transport of early and late endosomes to the late Golgi (721 aa)
     
 
  0.967
AT4G02030
Vps51/Vps67 family (components of vesicular transport) protein (805 aa)
     
 
  0.963
AT2G27900
Uncharacterized protein (1124 aa)
     
 
  0.731
AT5G44520
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (296 aa)
       
      0.699
EMB3119
EMBRYO DEFECTIVE 3119; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (276 aa)
       
      0.699
RPI2
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (265 aa)
       
      0.699
RSW10
RADIAL SWELLING 10; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (267 aa)
       
      0.699
THO1
THO complex subunit 1; Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export. Contributes to the integrity of the endogenous trans-acting small interfering RNA (ta-siRNA) pathway. May process or transport a long RNA molecule so that it can be a template for secondary siRNA production. May participate in the trafficking of siRNA precursors to the ARGONAUTE catalytic center. Required for the generation of functional messenger ribonucleoproteins (mRNPs). Plays an important roles in plant innate immunity (599 aa)
     
      0.662
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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