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AT1G51000 AT1G51000 AT5G03020 AT5G03020 AT2G19400 AT2G19400 SK8 SK8 AT3G57250 AT3G57250 AT5G46300 AT5G46300 AT1G20730 AT1G20730 AT1G07690 AT1G07690 AT1G61090 AT1G61090 AT1G60970 AT1G60970 AT1G52460 AT1G52460
"AT1G51000" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G51000Uncharacterized protein (72 aa)    
Predicted Functional Partners:
AT1G61090
Uncharacterized protein (118 aa)
     
   
  0.871
AT1G52460
alpha/beta-Hydrolases superfamily protein (230 aa)
     
   
  0.871
AT1G20730
Uncharacterized protein (256 aa)
     
   
  0.846
AT5G46300
Uncharacterized protein (208 aa)
     
   
  0.844
SK8
SKP1-like 8; Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F- box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F- box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1 (By similarity) (152 aa)
     
   
  0.805
AT3G57250
Emsy N Terminus (ENT) domain-containing protein (142 aa)
     
   
  0.787
AT5G03020
F-box/kelch-repeat protein (347 aa)
           
  0.780
AT2G19400
cAMP-dependent, cGMP-dependent and protein kinase C-like protein (527 aa)
           
  0.780
AT1G60970
Coatomer subunit zeta-1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity) (177 aa)
           
  0.780
AT1G07690
Uncharacterized protein (179 aa)
           
  0.780
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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