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AT5G16280 AT5G16280 AT1G80500 AT1G80500 AT5G54750 AT5G54750 CLUB CLUB AT5G58030 AT5G58030 RAB1A RAB1A AT5G02280 AT5G02280 AT1G51160 AT1G51160 RA-5 RA-5 AT3G05000 AT3G05000 RAB1C RAB1C
"AT1G51160" - SNARE-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G51160SNARE-like protein (169 aa)    
Predicted Functional Partners:
AT5G54750
Transport protein particle (TRAPP) component (199 aa)
     
  0.998
AT5G58030
Transport protein particle (TRAPP) component (195 aa)
     
  0.998
AT5G02280
SNARE-like superfamily protein (141 aa)
     
0.996
AT1G80500
SNARE-like protein (135 aa)
     
  0.995
AT3G05000
Transport protein particle (TRAPP) component (173 aa)
     
  0.995
RA-5
RAS 5; Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (203 aa)
     
  0.989
RAB1A
RAB GTPase-1A; Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (By similarity) (202 aa)
       
  0.988
RAB1C
RAB GTPase homolog 1C; Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER) (By similarity) (202 aa)
       
  0.988
CLUB
CLUB; Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells (PubMed-20609115, PubMed-21689172). Required for the polarized and selective transport of PIN2, but not PIN1, to the plasma membrane. Not required for ER-to-Golgi as well as biosynthetic and endocytic vacuolar transport (PubMed-21689172) (1259 aa)
       
 
  0.953
AT5G16280
Uncharacterized protein (1272 aa)
       
 
  0.953
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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