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CDC5 CDC5 AT5G28740 AT5G28740 MAC3B MAC3B PRL1 PRL1 AT4G21110 AT4G21110 AT5G64270 AT5G64270 U2A U2A MAC3A MAC3A SKIP SKIP AT1G52325 AT1G52325 AT1G10580 AT1G10580
"AT1G52325" - Initiation factor eIF-4 gamma, MA3 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
AT1G52325Initiation factor eIF-4 gamma, MA3 (145 aa)    
Predicted Functional Partners:
AT5G64270
Putative splicing factor (1269 aa)
     
    0.998
AT5G28740
pre-mRNA-splicing factor SYF1 (917 aa)
     
  0.997
CDC5
Cell division cycle 5; Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Possesses a sequence specific DNA sequence ’CTCAGCG’ binding activity. Involved in mRNA splicing and cell cycle control. May also play a role in the response to DNA damage (844 aa)
     
  0.996
MAC3B
MOS4-associated complex 3B; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (525 aa)
     
  0.996
MAC3A
MOS4-associated complex 3A; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (523 aa)
     
  0.996
AT1G10580
pre-mRNA-processing factor 17 (573 aa)
     
  0.996
AT4G21110
G10 family protein (145 aa)
     
  0.996
SKIP
Chromatin protein family; Splicing factor involved in post-transcriptional regulation of circadian clock and flowering time genes. Associates with the pre-mRNA of PRR7, PRR9, ELF3 and GI, and is necessary for the regulation of their alternative splicing and mRNA maturation. Probably involved in splice site recognition (613 aa)
     
  0.995
U2A
U2 small nuclear ribonucleoprotein A; This protein is associated with sn-RNP U2. It helps the A’ protein to bind stem loop IV of U2 snRNA (By similarity) (249 aa)
     
    0.994
PRL1
Pleiotropic regulatory locus 1; Pleiotropic regulator of glucose, stress and hormone responses. Also regulates cytochrome P450 CYP90A1/CPD. Coordinates the expression of hormone- and stress-related genes and genes related to cell wall modification and growth, leading to altered sugar-dependent growth and developmental responses. Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. By suppressing the expression of several (1)O(2)- responsive genes, PRL1 seems to play a major role in mod [...] (486 aa)
     
  0.994
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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