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UBQ6 UBQ6 UBA1 UBA1 STV1 STV1 AT1G15470 AT1G15470 RPL24A RPL24A CYCD3;3 CYCD3;3 AT1G52730 AT1G52730 AT3G15610 AT3G15610 ECB2 ECB2 BOR4 BOR4 IAA6 IAA6
"AT1G52730" - transducin/WD-40 repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G52730transducin/WD-40 repeat-containing protein (343 aa)    
Predicted Functional Partners:
BOR4
Boron transporter 4; Efflux-type boron transporter polarly localized in roots. Boron is essential for maintaining the integrity of plants cell walls (683 aa)
           
  0.840
CYCD3;3
CYCLIN D3;3 (361 aa)
       
      0.828
AT3G15610
transducin/WD40 domain-containing protein (341 aa)
   
   
0.803
AT1G15470
Transducin/WD40 repeat-like superfamily protein (333 aa)
   
   
 
0.801
ECB2
EARLY CHLOROPLAST BIOGENESIS2 (866 aa)
           
  0.710
IAA6
Indole-3-acetic acid 6; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression (189 aa)
           
  0.632
UBQ6
Ubiquitin 6; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-11-linked is involved in ERAD (endoplasmic re [...] (157 aa)
       
      0.615
STV1
SHORT VALVE1; Might have an extraribosomal function in reinitiation of translation of ETTIN and MONOPTEROS genes that are involved in the auxin-mediated gynoecium patterning (163 aa)
       
      0.604
RPL24A
Ribosomal protein L24; Might have an extraribosomal function in reinitiation of translation (164 aa)
       
      0.604
UBA1
Ubiquitin-activating enzyme 1; Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin- E1 thioester and free AMP (1080 aa)
     
      0.557
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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