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STRINGSTRING
AT5G41900 AT5G41900 LCB2 LCB2 AT5G20060 AT5G20060 AT4G25290 AT4G25290 AT1G52750 AT1G52750 AT5G17720 AT5G17720 AT4G24140 AT4G24140 PHYLLO PHYLLO ICS2 ICS2 EDS16 EDS16 CYP77A5P CYP77A5P
"AT1G52750" - alpha/beta-Hydrolases superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G52750alpha/beta-Hydrolases superfamily protein (633 aa)    
Predicted Functional Partners:
AT5G17720
Hydrolase, alpha/beta fold family protein (443 aa)
           
  0.924
AT4G25290
DNA photolyase (692 aa)
           
  0.924
PHYLLO
PHYLLO; Multifunctional enzyme required for phylloquinone (vitamin K1) biosynthesis (1715 aa)
   
 
  0.891
AT5G41900
Hydrolase, alpha/beta fold family protein (471 aa)
           
  0.866
AT4G24140
Hydrolase, alpha/beta fold family protein (498 aa)
           
  0.808
CYP77A5P
Cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene (410 aa)
       
  0.744
EDS16
Isochorismate synthase 1; Involved in the synthesis of salicylic acid (SA) required for both local and systemic acquired resistance (LAR and SAR) while SA synthesized through the phenylalanine ammonium lyase (PAL) pathway seems to potentiate plant cell death. Also involved in phylloquinone (vitamin K1) synthesis. Has no isochorismate pyruvate lyase (IPL) activity (622 aa)
       
  0.743
ICS2
Isochorismate synthase 2; Involved in the synthesis of salicylic acid (SA) required for both local and systemic acquired resistance (LAR and SAR) while SA synthesized through the phenylalanine ammonium lyase (PAL) pathway seems to potentiate plant cell death. Also involved in phylloquinone (vitamin K1) synthesis. Has no isochorismate pyruvate lyase (IPL) activity (562 aa)
       
  0.743
AT5G20060
alpha/beta-Hydrolases superfamily protein (252 aa)
   
   
  0.697
LCB2
Long chain base2; Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1 constitutes the catalytic core. Involved in the regulation of the programmed cell death (PCD) signaling pathway. Plays an important role during male gametogenesis and embryogenesis (489 aa)
     
  0.692
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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