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UPM1 UPM1 AT1G64385 AT1G64385 AT5G65590 AT5G65590 AT5G65600 AT5G65600 AT3G27390 AT3G27390 AT1G52820 AT1G52820 AT3G27400 AT3G27400 AT1G06645 AT1G06645 GH9C2 GH9C2 AT5G35930 AT5G35930 CYP712A1 CYP712A1
"AT1G52820" - Putative 2-oxoglutarate-dependent dioxygenase in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
AT1G52820Putative 2-oxoglutarate-dependent dioxygenase (317 aa)    
Predicted Functional Partners:
AT3G27390
Uncharacterized protein (588 aa)
           
  0.842
AT1G64385
Uncharacterized protein (351 aa)
           
  0.842
AT3G27400
Pectate lyase (412 aa)
           
  0.740
AT5G65600
Concanavalin A-like lectin kinase-like protein (675 aa)
           
  0.672
GH9C2
Endoglucanase 6 (620 aa)
           
  0.670
AT1G06645
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein (366 aa)
   
          0.525
CYP712A1
Member of CYP712A (514 aa)
     
   
  0.524
AT5G35930
AMP-dependent synthetase and ligase family protein (1040 aa)
         
  0.524
AT5G65590
Dof zinc finger protein DOF5.7; Transcription factor that binds specifically to a 5’- AA[AG]G-3’ consensus core sequence (316 aa)
           
  0.493
UPM1
Urophorphyrin methylase 1 (369 aa)
           
  0.473
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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