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AT1G68180 AT1G68180 AT5G10650 AT5G10650 AT2G15580 AT2G15580 AT4G10160 AT4G10160 AT1G23980 AT1G23980 AT1G53025 AT1G53025 UBC22 UBC22 UBC17 UBC17 AT1G80400 AT1G80400 AT2G22120 AT2G22120 AT4G11680 AT4G11680
"AT1G53025" - Ubiquitin-conjugating enzyme family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
AT1G53025Ubiquitin-conjugating enzyme family protein; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (543 aa)    
Predicted Functional Partners:
AT2G22120
RING/FYVE/PHD zinc finger-containing protein (363 aa)
     
   
  0.822
AT4G11680
E3 ubiquitin-protein ligase; Mediates E2-dependent protein ubiquitination in vitro (390 aa)
     
 
  0.811
AT1G80400
RING/U-box superfamily protein (407 aa)
     
 
  0.811
UBC22
Ubiquitin-conjugating enzyme 22; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (251 aa)
       
 
  0.810
UBC17
Ubiquitin-conjugating enzyme; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins (161 aa)
       
 
  0.749
AT2G15580
RING/U-box superfamily protein (196 aa)
     
 
  0.747
AT5G10650
RING/U-box superfamily protein (525 aa)
     
 
  0.686
AT4G10160
RING/U-box superfamily protein; E3 ubiquitin-protein ligase able to catalyze polyubiquitination with ubiquitin-conjugating enzyme E2 UBC8, UBC10, UBC11, and UBC34 in vitro (225 aa)
     
 
  0.686
AT1G68180
RING/U-box superfamily protein (248 aa)
     
 
  0.686
AT1G23980
RING-H2 finger protein ATL47 (369 aa)
     
 
  0.686
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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