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AT2G17960 AT2G17960 AT5G57535 AT5G57535 AT5G53790 AT5G53790 AT5G50910 AT5G50910 AT5G53205 AT5G53205 AT5G57730 AT5G57730 AT5G38370 AT5G38370 AT2G04300 AT2G04300 AT1G53325 AT1G53325 AT2G42550 AT2G42550 AT4G15060 AT4G15060
"AT1G53325" - F-box associated ubiquitination effector-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G53325F-box associated ubiquitination effector-like protein (168 aa)    
Predicted Functional Partners:
AT2G04300
Putative leucine-rich repeat protein kinase (851 aa)
     
        0.457
AT2G42550
Protein kinase-like protein (344 aa)
     
        0.448
AT5G53790
Uncharacterized protein (380 aa)
     
        0.446
AT2G17960
Uncharacterized protein (121 aa)
     
        0.444
AT5G38370
Uncharacterized protein (100 aa)
     
        0.442
AT4G15060
Uncharacterized protein (539 aa)
     
        0.439
AT5G57730
Uncharacterized protein (42 aa)
     
        0.438
AT5G57535
Uncharacterized protein (44 aa)
     
        0.438
AT5G53205
Uncharacterized protein (58 aa)
     
        0.438
AT5G50910
Uncharacterized protein (116 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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